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hdWGCNA
0.4.00
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Vignettes
Core functionality
hdWGCNA in single-cell data
hdWGCNA in spatial transcriptomics data
Isoform co-expression network analysis with PacBio MAS-Seq
Network visualization
Biological context for co-expression modules
Differential module eigengene (DME) analysis
Module trait correlation
Enrichment analysis
Exploring modules in external datasets
Projecting modules to new datasets
Module preservation and reproducibility
Cross-species and cross-modality analysis
Advanced topics
Transcription factor regulatory network analysis
Consensus network analysis
hdWGCNA with pseudobulk data
Co-expression module dynamics with pseudotime
Other
Module customization
Alternative metacell algorithms
Using SCTransform normalized data
All vignettes
Reference
News
GetActiveWGCNA
Source:
R/getters_and_setters.R
GetActiveWGCNA.Rd
GetActiveWGCNA
Usage
GetActiveWGCNA
(
seurat_obj
)
Arguments
seurat_obj
A Seurat object
