Tutorial for applying the core functions of hdWGCNA in spatial transcriptomics data.
Tutorial for applying the core functions of hdWGCNA in single-cell data.
Tutorial for performing consensus co-expression network analysis.
Tutorial for customizing module colors and module names in hdWGCNA.
Tutorial for performing differential module eigengene analysis.
Tutorial for performing enrichment analysis with hdWGCNA.
Document showing an overview of the different analysis vignettes.
Full Seurat clustering and hdWGCNA analysis tutorial of PacBio MAS-Seq PBMC dataset.
Tutorial for performing module preservation tests in hdWGCNA.
Tutorial for identifying relationships between hdWGCNA modules with biological and technical variables.
Tutorial for identifying transcription factor binding motifs that are related to hdWGCNA modules.
Tutorial for visualizing the hdWGCNA networks using igraph.
Tutorial for performing co-expression network analysis using alternative metacell aggregation algorithms.
Tutorial for applying the core functions of hdWGCNA.
Projecting hdWGCNA co-expression modules across species and -omics modalities.
Tutorial for running hdWGCNA with pseudobulk data rather than metacells/metaspots .
Full Seurat clustering and hdWGCNA analysis tutorial of PacBio MAS-Seq PBMC dataset.
Tutorial demonstrating hdWGCNA with SCTransform normalized data.