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GetHubGenes

Source: R/getters_and_setters.R
GetHubGenes.Rd

Extract the top N hub genes for a given set of modules. This function outputs a table with the gene name, the module, and the kME for that module for the top N hub genes.

Usage

GetHubGenes(seurat_obj, n_hubs = 10, mods = NULL, wgcna_name = NULL)

Arguments

seurat_obj

A Seurat object

n_hubs

the number of hub genes to select for each module

mods

list of modules, selects all modules by default

wgcna_name

The name of the hdWGCNA experiment in the seurat_obj@misc slot