Plotting function for the results of FindDMEs and FindAllDMEs
Usage
PlotDMEsLollipop(
seurat_obj,
DMEs,
wgcna_name,
group.by = NULL,
comparison = NULL,
pvalue,
avg_log2FC = "avg_log2FC"
)Arguments
- seurat_obj
A Seurat object
- DMEs
dataframe output from FindDMEs or FindAllDMEs
- group.by
the column name of the selected comparison in the DMEs dataframe
- comparison
character vector or a list of character vectors containing the comparison in the DMEs dataframe
- pvalue
p_value or fdr used for the comparison in the DMEs dataframe