Plotting function for Module Preservation statistics
Usage
PlotModulePreservation(
seurat_obj,
name,
statistics = "summary",
plot_labels = TRUE,
label_size = 4,
mod_point_size = 4,
wgcna_name = NULL
)Arguments
- seurat_obj
A Seurat object
- name
The name of the module preservation analysis to plot given in ModulePreservation
- statistics
Which module preservation statistics to plot? Choices are summary, all, or a custom list
- plot_labels
logical determining whether to plot the module labels
- label_size
the size of the module labels
- mod_point_size
the size of the points in each plot
- wgcna_name
The name of the hdWGCNA experiment in the seurat_obj@misc slot